!!CODON_FREQUENCY 1.0 CODONFREQUENCY January 22, 1991 15:12 From an existing codon frequency file: Mzeg3pd_1509_3155.Cod FileCheck: 8741 From an existing codon frequency file: Mzegapdha_1_1152.Cod FileCheck: 2022 From an existing codon frequency file: Mzelhcp_65_862.Cod FileCheck: 1460 From an existing codon frequency file: Mzenar1_12_386.Cod FileCheck: 3954 From an existing codon frequency file: Mzenar2_1_312.Cod FileCheck: 9357 From an existing codon frequency file: Mzeh3c2_422_832.Cod FileCheck: 7036 From an existing codon frequency file: Mzeh3c4_526_936.Cod FileCheck: 7162 From an existing codon frequency file: Mzeh4c7_350_661.Cod FileCheck: 9222 From an existing codon frequency file: Mzepcssu_66_578.Cod FileCheck: 217 From an existing codon frequency file: Mzerbcs_491_1163.Cod FileCheck: 5620 From an existing codon frequency file: Mzeze15a3_159_701.Cod FileCheck: 8593 From an existing codon frequency file: Mzeze15g_234_776.Cod FileCheck: 1387 From an existing codon frequency file: Mzebrnzw_884_2404.Cod FileCheck: 2980 From an existing codon frequency file: Mzebrnzza_1113_2628.Cod FileCheck: 8093 From an existing codon frequency file: Mzempl3_1_444.Cod FileCheck: 2566 From an existing codon frequency file: Mzecat3i_22_1509.Cod FileCheck: 7543 From an existing codon frequency file: Mzeggst3b_28_690.Cod FileCheck: 7749 From an existing codon frequency file: Mzegst3a_9_671.Cod FileCheck: 488 From an existing codon frequency file: Mzeglb1sa_37_1758.Cod FileCheck: 1634 From an existing codon frequency file: Mzewaxy_1233_4343.Cod FileCheck: 2381 From an existing codon frequency file: Mzegst3aa_75_743.Cod FileCheck: 9042 From an existing codon frequency file: Mzeadh2nr_127_1266.Cod FileCheck: 1321 From an existing codon frequency file: Mzeadh2n_414_3263.Cod FileCheck: 2363 From an existing codon frequency file: Mzeregg_376_2208.Cod FileCheck: 5280 From an existing codon frequency file: Mzenar_1_1857.Cod FileCheck: 2996 From an existing codon frequency file: Mzepepcr_1_2808.Cod FileCheck: 7672 From an existing codon frequency file: Mzea1g_686_2120.Cod FileCheck: 7686 From an existing codon frequency file: Mzecat2_1_1482.Cod FileCheck: 6970 From an existing codon frequency file: Mzepltp_102_464.Cod FileCheck: 1397 From an existing codon frequency file: Mzeeg2r_13_684.Cod FileCheck: 3178 From an existing codon frequency file: Mzezeg_1_630.Cod FileCheck: 3806 From an existing codon frequency file: Mzeglut2e_596_1267.Cod FileCheck: 7776 From an existing codon frequency file: Mzeze16_66_617.Cod FileCheck: 146 From an existing codon frequency file: Mzetac_3739_4203.Cod FileCheck: 5548 From an existing codon frequency file: Mzeh4c14_472_783.Cod FileCheck: 5486 Codon usage for maize (highly expressed) genes 1/24/91 AmAcid Codon Number /1000 Fraction .. Gly GGG 198.00 18.34 0.23 Gly GGA 71.00 6.58 0.08 Gly GGT 66.00 6.11 0.08 Gly GGC 527.00 48.81 0.61 Glu GAG 534.00 49.46 0.88 Glu GAA 71.00 6.58 0.12 Asp GAT 31.00 2.87 0.06 Asp GAC 481.00 44.55 0.94 Val GTG 396.00 36.68 0.47 Val GTA 22.00 2.04 0.03 Val GTT 44.00 4.08 0.05 Val GTC 384.00 35.57 0.45 Ala GCG 446.00 41.31 0.39 Ala GCA 71.00 6.58 0.06 Ala GCT 116.00 10.74 0.10 Ala GCC 503.00 46.59 0.44 Arg AGG 155.00 14.36 0.22 Arg AGA 25.00 2.32 0.04 Ser AGT 18.00 1.67 0.03 Ser AGC 207.00 19.17 0.30 Lys AAG 408.00 37.79 0.92 Lys AAA 34.00 3.15 0.08 Asn AAT 29.00 2.69 0.10 Asn AAC 265.00 24.54 0.90 Met ATG 262.00 24.27 1.00 Ile ATA 27.00 2.50 0.07 Ile ATT 29.00 2.69 0.07 Ile ATC 354.00 32.79 0.86 Thr ACG 199.00 18.43 0.36 Thr ACA 35.00 3.24 0.06 Thr ACT 33.00 3.06 0.06 Thr ACC 281.00 26.03 0.51 Trp TGG 141.00 13.06 1.00 End TGA 25.00 2.32 0.74 Cys TGT 23.00 2.13 0.10 Cys TGC 210.00 19.45 0.90 End TAG 6.00 0.56 0.18 End TAA 3.00 0.28 0.09 Tyr TAT 7.00 0.65 0.02 Tyr TAC 275.00 25.47 0.98 Leu TTG 43.00 3.98 0.05 Leu TTA 3.00 0.28 0.00 Phe TTT 18.00 1.67 0.05 Phe TTC 352.00 32.60 0.95 Ser TCG 154.00 14.26 0.22 Ser TCA 26.00 2.41 0.04 Ser TCT 29.00 2.69 0.04 Ser TCC 251.00 23.25 0.37 Arg CGG 136.00 12.60 0.20 Arg CGA 27.00 2.50 0.04 Arg CGT 43.00 3.98 0.06 Arg CGC 311.00 28.80 0.45 Gln CAG 406.00 37.60 0.91 Gln CAA 42.00 3.89 0.09 His CAT 44.00 4.08 0.16 His CAC 236.00 21.86 0.84 Leu CTG 404.00 37.42 0.44 Leu CTA 21.00 1.94 0.02 Leu CTT 41.00 3.80 0.04 Leu CTC 415.00 38.44 0.45 Pro CCG 356.00 32.97 0.45 Pro CCA 108.00 10.00 0.14 Pro CCT 58.00 5.37 0.07 Pro CCC 261.00 24.17 0.33