!!CODON_FREQUENCY 1.0 CODONFREQUENCY January 22, 1991 15:51 From an existing codon frequency file: Dromyhc_1_1774.Cod FileCheck: 7441 From an existing codon frequency file: Dromyhc_1_756.Cod FileCheck: 34 From an existing codon frequency file: Drorp21c_49_387.Cod FileCheck: 8753 From an existing codon frequency file: Dromyhb_2381_4655.Cod FileCheck: 2770 From an existing codon frequency file: Dromyla_767_2263.Cod FileCheck: 8932 From an existing codon frequency file: Drorpa1g_342_683.Cod FileCheck: 7856 From an existing codon frequency file: Drorpa1r_90_431.Cod FileCheck: 566 From an existing codon frequency file: Drochorsg_3642_4252.Cod FileCheck: 4957 From an existing codon frequency file: Drochors3_3364_4510.Cod FileCheck: 3754 From an existing codon frequency file: Drorps17_647_1458.Cod FileCheck: 3499 From an existing codon frequency file: Dromylalk_530_2545.Cod FileCheck: 9684 From an existing codon frequency file: Dromyl_44_511.Cod FileCheck: 6320 From an existing codon frequency file: Dromylalk_530_2702.Cod FileCheck: 164 From an existing codon frequency file: Drosodg_414_1600.Cod FileCheck: 9022 From an existing codon frequency file: Drosod_69_530.Cod FileCheck: 2735 From an existing codon frequency file: Drochorsg_2259_2677.Cod FileCheck: 1266 From an existing codon frequency file: Dros18s15_3118_3536.Cod FileCheck: 8644 From an existing codon frequency file: Drorgps14_1572_2086.Cod FileCheck: 5737 From an existing codon frequency file: Drorgps14_405_919.Cod FileCheck: 7878 From an existing codon frequency file: Dromp20_1008_1769.Cod FileCheck: 1890 From an existing codon frequency file: Drpadhg_927_1814.Cod FileCheck: 9982 From an existing codon frequency file: Drotro14_12_845.Cod FileCheck: 1681 From an existing codon frequency file: Drotropi2_610_2772.Cod FileCheck: 479 From an existing codon frequency file: Drotropi2_610_1830.Cod FileCheck: 2103 From an existing codon frequency file: Droact88f_684_1874.Cod FileCheck: 6249 From an existing codon frequency file: Droact8f_6_1136.Cod FileCheck: 4660 From an existing codon frequency file: Droact79b_519_2009.Cod FileCheck: 5532 From an existing codon frequency file: Drorib_867_1333.Cod FileCheck: 3408 From an existing codon frequency file: Drochorsg_565_1259.Cod FileCheck: 1817 From an existing codon frequency file: Dros18s15_1424_2118.Cod FileCheck: 2395 From an existing codon frequency file: Drotrya_67_837.Cod FileCheck: 3996 From an existing codon frequency file: Droser2_1885_2682.Cod FileCheck: 1667 From an existing codon frequency file: Droser2_352_1149.Cod FileCheck: 4048 From an existing codon frequency file: Droamyag1_478_1962.Cod FileCheck: 6976 From an existing codon frequency file: Drotubb1a_1_1344.Cod FileCheck: 6850 From an existing codon frequency file: Droef1af1_2063_3454.Cod FileCheck: 3878 From an existing codon frequency file: Drof1ga_201_1592.Cod FileCheck: 1647 From an existing codon frequency file: Drotuba1_203_2046.Cod FileCheck: 6293 From an existing codon frequency file: Drotuba3_607_1959.Cod FileCheck: 2823 From an existing codon frequency file: Droact87ea_983_2113.Cod FileCheck: 6433 From an existing codon frequency file: Droact87e_6_1136.Cod FileCheck: 3275 From an existing codon frequency file: Drohsp83a_2168_3292.Cod FileCheck: 709 From an existing codon frequency file: Drshsp82_1948_3072.Cod FileCheck: 1137 From an existing codon frequency file: Drohsp82_2157_4310.Cod FileCheck: 2697 From an existing codon frequency file: Droact5cx_25_1155.Cod FileCheck: 8776 From an existing codon frequency file: Drorpl1r_70_1293.Cod FileCheck: 3556 From an existing codon frequency file: Drogadph1_414_1412.Cod FileCheck: 4979 From an existing codon frequency file: Drogadph2_1058_2056.Cod FileCheck: 2058 From an existing codon frequency file: Droyp3g_1880_3276.Cod FileCheck: 741 From an existing codon frequency file: Droyp3_1882_3278.Cod FileCheck: 3985 From an existing codon frequency file: Droyp12_3075_4470.Cod FileCheck: 7197 From an existing codon frequency file: Droyp12_342_1738.Cod FileCheck: 478 From an existing codon frequency file: Droadhca_841_1746.Cod FileCheck: 9561 From an existing codon frequency file: Droadhcb_841_1746.Cod FileCheck: 9905 From an existing codon frequency file: Droadha_5544_6449.Cod FileCheck: 3674 From an existing codon frequency file: Droadhcc_5549_6454.Cod FileCheck: 2116 From an existing codon frequency file: Droadh_1044_1949.Cod FileCheck: 5328 From an existing codon frequency file: Droadhcd_841_1746.Cod FileCheck: 8542 From an existing codon frequency file: Droadhch_883_1788.Cod FileCheck: 9227 From an existing codon frequency file: Droadhcj_883_1788.Cod FileCheck: 9287 From an existing codon frequency file: Droadhb_853_1758.Cod FileCheck: 3117 From an existing codon frequency file: Droadhcf_841_1746.Cod FileCheck: 8585 From an existing codon frequency file: Droadhcg_841_1746.Cod FileCheck: 8903 From an existing codon frequency file: Droadhci_883_1788.Cod FileCheck: 9257 From an existing codon frequency file: Droadhck_5359_6264.Cod FileCheck: 3036 From an existing codon frequency file: Droadhce_841_1746.Cod FileCheck: 7586 From an existing codon frequency file: Drsadhgx_1001_1903.Cod FileCheck: 340 From an existing codon frequency file: Drmadha_2086_2989.Cod FileCheck: 3141 From an existing codon frequency file: Drqadhg2_2083_2986.Cod FileCheck: 8801 From an existing codon frequency file: Drmadhg_935_1835.Cod FileCheck: 7198 From an existing codon frequency file: Drmadhga_127_826.Cod FileCheck: 2856 From an existing codon frequency file: Drradhg_778_1674.Cod FileCheck: 5575 From an existing codon frequency file: Drsadha_2104_3010.Cod FileCheck: 817 From an existing codon frequency file: Drsadhga_127_829.Cod FileCheck: 3642 From an existing codon frequency file: Droadhla_3_775.Cod FileCheck: 3310 From an existing codon frequency file: Droawdr_26_487.Cod FileCheck: 4066 From an existing codon frequency file: Drovita_124_549.Cod FileCheck: 1276 From an existing codon frequency file: Drohsc7c_1_312.Cod FileCheck: 1376 Codon usage for Drosophila (highly expressed) genes 1/22/91 AmAcid Codon Number /1000 Fraction .. Gly GGG 6.00 0.28 0.00 Gly GGA 380.00 18.04 0.22 Gly GGT 575.00 27.29 0.34 Gly GGC 746.00 35.41 0.44 Glu GAG 1217.00 57.77 0.91 Glu GAA 115.00 5.46 0.09 Asp GAT 503.00 23.88 0.43 Asp GAC 654.00 31.04 0.57 Val GTG 719.00 34.13 0.45 Val GTA 29.00 1.38 0.02 Val GTT 226.00 10.73 0.14 Val GTC 608.00 28.86 0.38 Ala GCG 94.00 4.46 0.05 Ala GCA 80.00 3.80 0.04 Ala GCT 446.00 21.17 0.24 Ala GCC 1277.00 60.61 0.67 Arg AGG 48.00 2.28 0.06 Arg AGA 12.00 0.57 0.01 Ser AGT 16.00 0.76 0.01 Ser AGC 267.00 12.67 0.23 Lys AAG 1360.00 64.55 0.93 Lys AAA 108.00 5.13 0.07 Asn AAT 127.00 6.03 0.13 Asn AAC 878.00 41.67 0.87 Met ATG 387.00 18.37 1.00 Ile ATA 4.00 0.19 0.00 Ile ATT 390.00 18.51 0.29 Ile ATC 969.00 45.99 0.71 Thr ACG 114.00 5.41 0.08 Thr ACA 34.00 1.61 0.02 Thr ACT 164.00 7.78 0.11 Thr ACC 1127.00 53.49 0.78 Trp TGG 243.00 11.53 1.00 End TGA 1.00 0.05 0.01 Cys TGT 20.00 0.95 0.08 Cys TGC 220.00 10.44 0.92 End TAG 12.00 0.57 0.17 End TAA 58.00 2.75 0.82 Tyr TAT 113.00 5.36 0.16 Tyr TAC 574.00 27.25 0.84 Leu TTG 210.00 9.97 0.12 Leu TTA 9.00 0.43 0.01 Phe TTT 62.00 2.94 0.09 Phe TTC 635.00 30.14 0.91 Ser TCG 195.00 9.26 0.17 Ser TCA 29.00 1.38 0.02 Ser TCT 103.00 4.89 0.09 Ser TCC 558.00 26.49 0.48 Arg CGG 7.00 0.33 0.01 Arg CGA 25.00 1.19 0.03 Arg CGT 281.00 13.34 0.34 Arg CGC 465.00 22.07 0.55 Gln CAG 703.00 33.37 0.91 Gln CAA 66.00 3.13 0.09 His CAT 88.00 4.18 0.22 His CAC 312.00 14.81 0.78 Leu CTG 1182.00 56.10 0.69 Leu CTA 21.00 1.00 0.01 Leu CTT 55.00 2.61 0.03 Leu CTC 224.00 10.63 0.13 Pro CCG 84.00 3.99 0.09 Pro CCA 135.00 6.41 0.15 Pro CCT 72.00 3.42 0.08 Pro CCC 626.00 29.71 0.68