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Usage of EMBOSS GUI applications
(Screen recorded videos. Each video is an executable file, just download and execute them to see the exercise.) |
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Introduction to database and applications: Showdb, Wossname |
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Sequence retrieval and reformat: Seqret ( Part I , Part II ) |
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Pairwise sequence alignment: Needle, Water |
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Multiple sequence alignment and consensus seqs: Emma, Showalign, Prettyplot |
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Restriction map and Open Reading Frame: Remap,
Showorf, Plotorf |
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Primers prediction and design: Eprimer3 |
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Usage of JEMBOSS applications
(Streaming format videos) |
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Introduction
and JEMBOSS system |
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Databases, sequence retrieval and reformat
: Showdb, Wossname, Seqret |
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Sequence retrieval : Entrez, ExPASy |
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Pairwise sequence alignment
: Dottup, Dotmatcher, Needle, Water |
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Multiple sequence alignment and consensus seqs:
Emma, Showalign, Prettyplot |
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Restriction map and Open Reading Frame : Remap,
Showorf, Plotorf |
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Sequence edit programs and Eprimer3 |
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